scATAC-seq Insights

What is scATAC-seq?

scATAC-seq (single-cell Assay for Transposase-Accessible Chromatin using sequencing) is a high-throughput method used to profile genome-wide chromatin accessibility in thousands of single cells. It reveals the regulatory landscape of individual cells, allowing researchers to study cell heterogeneity, identify cell types, and map gene regulatory networks.

Find organizations using scATAC-seq on Sumble →

What other technologies are related to scATAC-seq?

scATAC-seq Complementary Technologies

scRNA-seq

Single-cell RNA sequencing measures gene expression in individual cells, and when combined with scATAC-seq, provides a more complete view of gene regulation.

mentioned alongside scATAC-seq in 23% (279) of relevant job posts

CITE-seq

Cellular Indexing of Transcriptomes and Epitopes by Sequencing allows simultaneous measurement of RNA and protein levels in single cells. This can be used in conjunction with scATAC-seq for multi-omic analysis.

mentioned alongside scATAC-seq in 14% (57) of relevant job posts

ATAC-seq

ATAC-seq measures genome-wide chromatin accessibility. scATAC-seq is a single-cell version of ATAC-seq, so they share the same underlying principle. Thus they are considered complementary.

mentioned alongside scATAC-seq in 3% (76) of relevant job posts