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RNAseq

RNAseq

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What is RNAseq?

RNA-Seq (RNA sequencing) is a technique used to analyze the transcriptome of a cell or tissue. It involves converting RNA into a library of cDNA fragments, sequencing these fragments, and then mapping the reads to a reference genome or transcriptome. RNA-Seq is commonly used to quantify gene expression levels, discover new transcripts, identify alternative splicing events, and detect non-coding RNAs.

What other technologies are related to RNAseq?

RNAseq Competitor Technologies

Single-cell RNA-seq profiles gene expression in individual cells, similar to RNA-seq, but at a single-cell resolution, thus a competing technology for bulk RNA-seq.
mentioned alongside RNAseq in 24% (201) of relevant job posts
Single-cell RNA-seq profiles gene expression in individual cells, similar to RNA-seq, but at a single-cell resolution, thus a competing technology for bulk RNA-seq.
mentioned alongside RNAseq in 15% (88) of relevant job posts
NanoString is a targeted gene expression profiling technology that can be used to quantify mRNA levels, similar to RNA-seq, but without amplification.
mentioned alongside RNAseq in 11% (74) of relevant job posts
Microarrays are used for gene expression profiling, similarly to RNA-seq, making it a competing technology.
mentioned alongside RNAseq in 6% (55) of relevant job posts
Spatial transcriptomics profiles gene expression while preserving spatial information, similar to RNA-seq, but with spatial context, thus a competing technology for bulk RNA-seq when spatial information is important.
mentioned alongside RNAseq in 3% (85) of relevant job posts

RNAseq Complementary Technologies

ChIP-seq identifies DNA binding sites of proteins, which can be used in conjunction with RNA-seq to understand gene regulation.
mentioned alongside RNAseq in 67% (186) of relevant job posts
ATAC-seq maps accessible chromatin regions, providing insights into gene regulation and can complement RNA-seq data.
mentioned alongside RNAseq in 51% (158) of relevant job posts
Proteomics identifies and quantifies proteins, the end products of gene expression, providing a complementary view to RNA-seq.
mentioned alongside RNAseq in 5% (220) of relevant job posts

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