Cell Ranger
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What is Cell Ranger?
Cell Ranger is a set of analysis pipelines that perform sample demultiplexing, read alignment, barcode counting, and gene expression or feature counting for single-cell RNA-seq data generated by 10x Genomics platforms. It aggregates data across multiple samples and runs secondary analysis such as dimensionality reduction, clustering, and differential gene expression analysis.
What other technologies are related to Cell Ranger?
Cell Ranger Complementary Technologies
Seurat
Seurat is an R package designed for single-cell data analysis, often used downstream of Cell Ranger for tasks like clustering, differential gene expression analysis, and visualization.
R
R is a programming language and environment widely used for statistical computing and graphics. It is highly complementary as many single-cell analysis tools, like Seurat, are built using R and commonly used with Cell Ranger output.
Python
Python is a general-purpose programming language that is used extensively in single-cell analysis, including tools that work with Cell Ranger outputs, such as Scanpy. It provides alternative workflows and complements the use of Cell Ranger.
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Which job functions commonly mention Cell Ranger?
Bioinformatics
0.2% of all Bioinformatics jobs mention Cell Ranger
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jobs on Sumble
Bioinformatician
0.1% of all Bioinformatician jobs mention Cell Ranger
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jobs on Sumble
Biologist
0.1% of all Biologist jobs mention Cell Ranger
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jobs on Sumble
Scientist
60 Scientist jobs mention Cell Ranger
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jobs on Sumble
Researcher
18 Researcher jobs mention Cell Ranger
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jobs on Sumble
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