bcftools Insights

What is bcftools?

Bcftools is a set of utilities for variant calling and manipulating VCF (Variant Call Format) and BCF (Binary Call Format) files. It is commonly used for tasks such as indexing, filtering, merging, and summarizing variant data. Bcftools is often used in bioinformatics pipelines for analyzing genomic variation data, particularly in large-scale sequencing projects.

Find organizations using bcftools on Sumble →

What other technologies are related to bcftools?

bcftools Competitor Technologies

PLINK

PLINK is a whole genome association analysis toolset, and overlaps with some of the functionality of bcftools for variant filtering and manipulation.

mentioned alongside bcftools in 17% (80) of relevant job posts

GATK

GATK (Genome Analysis Toolkit) is a comprehensive toolkit for variant discovery and analysis, thus it competes with bcftools in certain areas such as variant calling and filtering.

mentioned alongside bcftools in 8% (57) of relevant job posts

bcftools Complementary Technologies

samtools

Samtools is used for manipulating sequence alignments in SAM/BAM/CRAM formats, providing essential utilities for preparing data used by bcftools. Bcftools and Samtools are part of the same htslib project and commonly used together.

mentioned alongside bcftools in 13% (79) of relevant job posts